Immunofluorescence:Article Title: Cytomegalovirus promotes murine glioblastoma growth via pericyte recruitment and angiogenesis
Article Snippet: .. For immunofluorescence studies, the following antibodies were used: anti-mouse, CD31 (Bio-Rad, catalog TLD-3A12, 1:100), PDGF-D (Thermo Fisher, catalog 40-2100, 1:100), and PDGFRβ (BioLegend, 323605, 1:100); anti-human, PDGF-D (R&D, catalog AF1159, 1:100), CD133 (BioLegend, catalog S16016B, 1:100), Vimentin (SP20, Thermo Fisher, catalog MA5-16409, 1:100), and CD31 (Bio-Rad, catalog MCA1738, 1:100); anti-human mouse Ki67 (Abcam, catalog ab15580, 1:100), NG2 (EMD Millipore, 1:100), and Olig2 (Merck, catalog MABN50, 1:100); anti-CMV (Virusys Corp., catalog CA150-1, 1:1000) and HCMV pp65 (Virusys, catalog CA003-100, 1:1000). .. Immunofluorescence staining using anti-CD31 antibodies (Bio-Rad, catalog MCA2388GA) was performed in coronal frozen brain sections.
other:Article Title: Sarcoma IL-12 overexpression facilitates NK cell immunomodulation
Article Snippet: The following antibodies were utilized: CD271 Alexa Fluor 647 anti-human (BD Biosciences #560326), CD45 APC anti-mouse (BioLegend #147708), CD45 Pacific Blue anti-human (BioLegend #304029), NKp46 PE anti-human (BioLegend #331908), CD16 APC anti-human (BioLegend #302012), CD56 Alexa Fluor 488 anti-human (BD Biosciences #557699), CD33 FITC anti-human (BioLegend #303304), CD19 PE-Texas Red anti-human (ThermoFisher #MHCD1917), CD3 PE-Cy7 anti-human (Cell Signaling #62670S), CD8a APC anti-human (BioLegend #300912), CD8 PE anti-human (Thermo Fisher #12-0089-42), CD4 Alexa Fluor 488 anti-human (BioLegend #317420), CD4 PE-Texas Red anti-human (Thermo Fisher #MHCD0417), CD4 Pacific Blue anti-human (Thermo Fisher #MHCD0428), IL-12 anti-human (R&D #MAB1510).
Virus:Article Title: Sequence enrichment profiles enable target-agnostic antibody generation for a broad range of antigens
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies APC Mouse anti-Human CD54 BD Biosciences Cat# 559771; RRID:AB_398667 APC Mouse anti-Human CD44 BD Biosciences Cat# 559942; RRID:AB_398683 PE Mouse anti-Human EGF Receptor BD Biosciences Cat# 555997; RRID:AB_396281 PE Mouse anti-Human HER-2/Neu BD Biosciences Cat# 340552; RRID:AB_400055 PE Mouse anti-Human ROR1 BD Biosciences Cat# 564474; RRID:AB_2738822 PE Mouse anti-Human CD40 BD Biosciences Cat# 555589; RRID:AB_395964 PE Mouse anti-Human CD130 BD Biosciences Cat# 555757; RRID:AB_396098 PE Mouse anti-Human CD55 BD Biosciences Cat# 561901; RRID:AB_10893598 PE CD59 Antibody, anti-human, REAfinityTM Miltenyi Cat# 130-120-048; RRID:AB_2751973 APC Mouse anti-Human CD71 BD Biosciences Cat# 551374; RRID:AB_398500 His Tag Alexa Fluor 647-conjugated Antibody R&D Systems Cat# IC0501R Mouse anti-FLAG M2, AP-conjugated Sigma-Aldrich Cat# A9469; RRID:AB_439699 Goat anti-human-Fc, APC conjugated Jackson Immunoresearch Cat# 109-136-098; RRID:AB_2337693 Bacterial and virus strains E.coli HB101F0 In house produced N/A E.coli Top10 Thermo Fisher Scientific Cat# C404010 R408 Helper phage Agilent Technologies Cat# 200252 Chemicals, peptides, and recombinant proteins ICAM-1 R&D Systems Cat# 720-IC CD44 Sino Biological Cat# 12211-H08H EGFR Sino Biological Cat# 10001-H08H HER2 Sino Biological Cat# 10004-H08H ROR1 Sino Biological Cat# 13968-H08H CD40 In house produced N/A CD130 Sino Biological Cat# 10974-HCCH CD55 Sino Biological Cat# 10101-H08H CD59 Sino Biological Cat# 12474-H08H CD71 Sino Biological Cat# 11020-H07H Experimental models: Cell lines Human: DU 145 ATCC Cat# HTB-81 Human: Jurkat, Clone E6-1 ATCC Cat# TIB-152 Human: HEK293 EBNA ATCC Cat# CRL-10852 Oligonucleotides Forward MiSeq1: 50-AATGATACGGCGACCA CCG AGATCTACACTCTTTCCCTACACGACGCTCTTCC GATCTttccctgagactctcctgtgcagcctctggattcacctt-30 Upper case - sequencing adaptors, lower case - scFv primers This paper N/A Forward MiSeq2, NextSeq: 50-AATGATACGG CGA CCACCGAGATCTACACTCTTTCCCTACACGACGC TCTTCCGATCTtagagccgaggacactgccgtgtattactgt-30 This paper N/A (Continued on next page) Cell Reports Methods 3, 100475, May 22, 2023 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER Reverse MiSeq1, NextSeq: 50-CAAGCAGAAG ACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCTTCCG ATCTcgctgctcacggtgaccagtgtaccttggcccca-30 This paper N/A Reverse MiSeq2: 50-CAAGCAGAA GACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCT TCCGATCTgtcagcttggttcctccgccgaa-30 This paper N/A Software and algorithms FlowJo v10.7.2 FlowJo, LLC https://www.flowjo.com/solutions/flowjo GraphPad Prism 9.5.1 GraphPad https://www.graphpad.com Report ll OPEN ACCESS
Produced:Article Title: Sequence enrichment profiles enable target-agnostic antibody generation for a broad range of antigens
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies APC Mouse anti-Human CD54 BD Biosciences Cat# 559771; RRID:AB_398667 APC Mouse anti-Human CD44 BD Biosciences Cat# 559942; RRID:AB_398683 PE Mouse anti-Human EGF Receptor BD Biosciences Cat# 555997; RRID:AB_396281 PE Mouse anti-Human HER-2/Neu BD Biosciences Cat# 340552; RRID:AB_400055 PE Mouse anti-Human ROR1 BD Biosciences Cat# 564474; RRID:AB_2738822 PE Mouse anti-Human CD40 BD Biosciences Cat# 555589; RRID:AB_395964 PE Mouse anti-Human CD130 BD Biosciences Cat# 555757; RRID:AB_396098 PE Mouse anti-Human CD55 BD Biosciences Cat# 561901; RRID:AB_10893598 PE CD59 Antibody, anti-human, REAfinityTM Miltenyi Cat# 130-120-048; RRID:AB_2751973 APC Mouse anti-Human CD71 BD Biosciences Cat# 551374; RRID:AB_398500 His Tag Alexa Fluor 647-conjugated Antibody R&D Systems Cat# IC0501R Mouse anti-FLAG M2, AP-conjugated Sigma-Aldrich Cat# A9469; RRID:AB_439699 Goat anti-human-Fc, APC conjugated Jackson Immunoresearch Cat# 109-136-098; RRID:AB_2337693 Bacterial and virus strains E.coli HB101F0 In house produced N/A E.coli Top10 Thermo Fisher Scientific Cat# C404010 R408 Helper phage Agilent Technologies Cat# 200252 Chemicals, peptides, and recombinant proteins ICAM-1 R&D Systems Cat# 720-IC CD44 Sino Biological Cat# 12211-H08H EGFR Sino Biological Cat# 10001-H08H HER2 Sino Biological Cat# 10004-H08H ROR1 Sino Biological Cat# 13968-H08H CD40 In house produced N/A CD130 Sino Biological Cat# 10974-HCCH CD55 Sino Biological Cat# 10101-H08H CD59 Sino Biological Cat# 12474-H08H CD71 Sino Biological Cat# 11020-H07H Experimental models: Cell lines Human: DU 145 ATCC Cat# HTB-81 Human: Jurkat, Clone E6-1 ATCC Cat# TIB-152 Human: HEK293 EBNA ATCC Cat# CRL-10852 Oligonucleotides Forward MiSeq1: 50-AATGATACGGCGACCA CCG AGATCTACACTCTTTCCCTACACGACGCTCTTCC GATCTttccctgagactctcctgtgcagcctctggattcacctt-30 Upper case - sequencing adaptors, lower case - scFv primers This paper N/A Forward MiSeq2, NextSeq: 50-AATGATACGG CGA CCACCGAGATCTACACTCTTTCCCTACACGACGC TCTTCCGATCTtagagccgaggacactgccgtgtattactgt-30 This paper N/A (Continued on next page) Cell Reports Methods 3, 100475, May 22, 2023 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER Reverse MiSeq1, NextSeq: 50-CAAGCAGAAG ACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCTTCCG ATCTcgctgctcacggtgaccagtgtaccttggcccca-30 This paper N/A Reverse MiSeq2: 50-CAAGCAGAA GACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCT TCCGATCTgtcagcttggttcctccgccgaa-30 This paper N/A Software and algorithms FlowJo v10.7.2 FlowJo, LLC https://www.flowjo.com/solutions/flowjo GraphPad Prism 9.5.1 GraphPad https://www.graphpad.com Report ll OPEN ACCESS
Recombinant:Article Title: Sequence enrichment profiles enable target-agnostic antibody generation for a broad range of antigens
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies APC Mouse anti-Human CD54 BD Biosciences Cat# 559771; RRID:AB_398667 APC Mouse anti-Human CD44 BD Biosciences Cat# 559942; RRID:AB_398683 PE Mouse anti-Human EGF Receptor BD Biosciences Cat# 555997; RRID:AB_396281 PE Mouse anti-Human HER-2/Neu BD Biosciences Cat# 340552; RRID:AB_400055 PE Mouse anti-Human ROR1 BD Biosciences Cat# 564474; RRID:AB_2738822 PE Mouse anti-Human CD40 BD Biosciences Cat# 555589; RRID:AB_395964 PE Mouse anti-Human CD130 BD Biosciences Cat# 555757; RRID:AB_396098 PE Mouse anti-Human CD55 BD Biosciences Cat# 561901; RRID:AB_10893598 PE CD59 Antibody, anti-human, REAfinityTM Miltenyi Cat# 130-120-048; RRID:AB_2751973 APC Mouse anti-Human CD71 BD Biosciences Cat# 551374; RRID:AB_398500 His Tag Alexa Fluor 647-conjugated Antibody R&D Systems Cat# IC0501R Mouse anti-FLAG M2, AP-conjugated Sigma-Aldrich Cat# A9469; RRID:AB_439699 Goat anti-human-Fc, APC conjugated Jackson Immunoresearch Cat# 109-136-098; RRID:AB_2337693 Bacterial and virus strains E.coli HB101F0 In house produced N/A E.coli Top10 Thermo Fisher Scientific Cat# C404010 R408 Helper phage Agilent Technologies Cat# 200252 Chemicals, peptides, and recombinant proteins ICAM-1 R&D Systems Cat# 720-IC CD44 Sino Biological Cat# 12211-H08H EGFR Sino Biological Cat# 10001-H08H HER2 Sino Biological Cat# 10004-H08H ROR1 Sino Biological Cat# 13968-H08H CD40 In house produced N/A CD130 Sino Biological Cat# 10974-HCCH CD55 Sino Biological Cat# 10101-H08H CD59 Sino Biological Cat# 12474-H08H CD71 Sino Biological Cat# 11020-H07H Experimental models: Cell lines Human: DU 145 ATCC Cat# HTB-81 Human: Jurkat, Clone E6-1 ATCC Cat# TIB-152 Human: HEK293 EBNA ATCC Cat# CRL-10852 Oligonucleotides Forward MiSeq1: 50-AATGATACGGCGACCA CCG AGATCTACACTCTTTCCCTACACGACGCTCTTCC GATCTttccctgagactctcctgtgcagcctctggattcacctt-30 Upper case - sequencing adaptors, lower case - scFv primers This paper N/A Forward MiSeq2, NextSeq: 50-AATGATACGG CGA CCACCGAGATCTACACTCTTTCCCTACACGACGC TCTTCCGATCTtagagccgaggacactgccgtgtattactgt-30 This paper N/A (Continued on next page) Cell Reports Methods 3, 100475, May 22, 2023 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER Reverse MiSeq1, NextSeq: 50-CAAGCAGAAG ACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCTTCCG ATCTcgctgctcacggtgaccagtgtaccttggcccca-30 This paper N/A Reverse MiSeq2: 50-CAAGCAGAA GACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCT TCCGATCTgtcagcttggttcctccgccgaa-30 This paper N/A Software and algorithms FlowJo v10.7.2 FlowJo, LLC https://www.flowjo.com/solutions/flowjo GraphPad Prism 9.5.1 GraphPad https://www.graphpad.com Report ll OPEN ACCESS
Sequencing:Article Title: Sequence enrichment profiles enable target-agnostic antibody generation for a broad range of antigens
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies APC Mouse anti-Human CD54 BD Biosciences Cat# 559771; RRID:AB_398667 APC Mouse anti-Human CD44 BD Biosciences Cat# 559942; RRID:AB_398683 PE Mouse anti-Human EGF Receptor BD Biosciences Cat# 555997; RRID:AB_396281 PE Mouse anti-Human HER-2/Neu BD Biosciences Cat# 340552; RRID:AB_400055 PE Mouse anti-Human ROR1 BD Biosciences Cat# 564474; RRID:AB_2738822 PE Mouse anti-Human CD40 BD Biosciences Cat# 555589; RRID:AB_395964 PE Mouse anti-Human CD130 BD Biosciences Cat# 555757; RRID:AB_396098 PE Mouse anti-Human CD55 BD Biosciences Cat# 561901; RRID:AB_10893598 PE CD59 Antibody, anti-human, REAfinityTM Miltenyi Cat# 130-120-048; RRID:AB_2751973 APC Mouse anti-Human CD71 BD Biosciences Cat# 551374; RRID:AB_398500 His Tag Alexa Fluor 647-conjugated Antibody R&D Systems Cat# IC0501R Mouse anti-FLAG M2, AP-conjugated Sigma-Aldrich Cat# A9469; RRID:AB_439699 Goat anti-human-Fc, APC conjugated Jackson Immunoresearch Cat# 109-136-098; RRID:AB_2337693 Bacterial and virus strains E.coli HB101F0 In house produced N/A E.coli Top10 Thermo Fisher Scientific Cat# C404010 R408 Helper phage Agilent Technologies Cat# 200252 Chemicals, peptides, and recombinant proteins ICAM-1 R&D Systems Cat# 720-IC CD44 Sino Biological Cat# 12211-H08H EGFR Sino Biological Cat# 10001-H08H HER2 Sino Biological Cat# 10004-H08H ROR1 Sino Biological Cat# 13968-H08H CD40 In house produced N/A CD130 Sino Biological Cat# 10974-HCCH CD55 Sino Biological Cat# 10101-H08H CD59 Sino Biological Cat# 12474-H08H CD71 Sino Biological Cat# 11020-H07H Experimental models: Cell lines Human: DU 145 ATCC Cat# HTB-81 Human: Jurkat, Clone E6-1 ATCC Cat# TIB-152 Human: HEK293 EBNA ATCC Cat# CRL-10852 Oligonucleotides Forward MiSeq1: 50-AATGATACGGCGACCA CCG AGATCTACACTCTTTCCCTACACGACGCTCTTCC GATCTttccctgagactctcctgtgcagcctctggattcacctt-30 Upper case - sequencing adaptors, lower case - scFv primers This paper N/A Forward MiSeq2, NextSeq: 50-AATGATACGG CGA CCACCGAGATCTACACTCTTTCCCTACACGACGC TCTTCCGATCTtagagccgaggacactgccgtgtattactgt-30 This paper N/A (Continued on next page) Cell Reports Methods 3, 100475, May 22, 2023 e1 .. REAGENT or RESOURCE SOURCE IDENTIFIER Reverse MiSeq1, NextSeq: 50-CAAGCAGAAG ACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCTTCCG ATCTcgctgctcacggtgaccagtgtaccttggcccca-30 This paper N/A Reverse MiSeq2: 50-CAAGCAGAA GACGGCATACGAGAT – 10nt Index – GTGACTGGAGTTCAGACGTGTGCTCT TCCGATCTgtcagcttggttcctccgccgaa-30 This paper N/A Software and algorithms FlowJo v10.7.2 FlowJo, LLC https://www.flowjo.com/solutions/flowjo GraphPad Prism 9.5.1 GraphPad https://www.graphpad.com Report ll OPEN ACCESS
In Vitro:Article Title: Blocking IL-2 Signal In Vivo with an IL-2 Antagonist Reduces Tumor Growth through the Control of Regulatory T Cells.
Article Snippet: Samples were measured using a FACScan or an LSRFortessa (BD Biosciences) flow cytometer and analyzed using FlowJo software (Tree Star). .. The mAbs anti-CD3, anti-CD28, and anti–IL-2 (S4B6) used for in vitro stimulation were purchased from BD Biosciences, and the anti-human IL-2(5334) was obtained from R&D Systems. .. Cell lines and culture conditions The murine CTLL-2 and the human Kit225 T cell lines were cultured in RPMI 1640 (Life Technologies) supplemented with 10% heat-inactivated FBS, 50 IU/ml IL-2, 2 mM L-glutamine, 50 U/ml penicillin, and 50 mg/ml streptomycin.
Expressing:Article Title: TIGIT antibodies, encoding nucleic acids and methods of using said antibodies in vivo
Article Snippet: .. Confirmation of target expression on cells was investigated by flow cytometry using anti-human (R&D Systems, Catalogue number MAB7898) and anti-mouse (Biolegend, Catalogue number 142102) TIGIT commercial antibodies. ..
Flow Cytometry:Article Title: TIGIT antibodies, encoding nucleic acids and methods of using said antibodies in vivo
Article Snippet: .. Confirmation of target expression on cells was investigated by flow cytometry using anti-human (R&D Systems, Catalogue number MAB7898) and anti-mouse (Biolegend, Catalogue number 142102) TIGIT commercial antibodies. ..
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